Table 1. MLST primers for Pediococcus pentosaceus
Gene | Primers | Protein | Sequence (5’ → 3’) | Alleles | Standard length (bp) |
gyrB | gyrB_F | Gyrase B | AGGGTGATTCTGCCGGTGG | 6 | 462 |
gyrB_R | ACCTTGTCACCCATCAACAT |
pyc | pyc_F | Pyruvate carboxylase | AACAATTGCGGGCTAAAATG | 9 | 603 |
pyc_R | GGCGCAGGTTGGTATACTGT |
pgm | pgm_F | Phosphoglucomutase | TTACGAAGAAAATGGCGAC | 8 | 321 |
pgm_R | AATTTCAAAACATCCGCTTT |
leuS | leuS_F | Leucyl-rRNA synthetase | GGGTGGAACGGTAGTTGCTA | 10 | 522 |
leuS_R | GCGAGAGAAGACCCAGTCAC |
glnA | glnA_F | Glutamine synthetase | AATCAATGGTTCAGGGATGC | 5 | 495 |
glnA_R | TTGACGGTAAGAAGCCCATTC |
dalR | dalR_ F | Glycil-tRNA synthetase | TGTCGAACTGGCTAATGCTG | 10 | 570 |
dalR_ R | CATGTAATGTTCGCGAATGG |
pgi | pgi_F | Glucose-6-phosphate | ATCGGTGACCGTGACTTCTC | 9 | 417 |
pgi_R | isomerase | ATCAAATTGCGACGACCTTC |
(PubMLST, 2015)